PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G253000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 453aa    MW: 49632.5 Da    PI: 4.8988
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G253000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.72.4e-15411761127
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkya.......tgkrknr.a 77 
                         lppG+ F+Pt +e v   L++ ++g++l+++   +   d+y + P++L++     +v++++++w+f + ++ +++         +r+ r +
  Brast05G253000.1.p  41 LPPGVYFSPTRDESV-GILNRWIAGEPLHETLGfVFVEDVYGSSPEELRRryppaCVRGRKHSWWFLCDTRFQSSkkppapgARRRADRrV 130
                         79*************.67*********76644426666**********7446777888888899999987766553344444223555548 PP

                 NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                         ++ gyW+   + k++ +    + g+k+ + fy g   k  kt W+++e++
  Brast05G253000.1.p 131 ATGGYWRLEQSRKDIPV----AGGVKNCFGFYLGPGGKRAKTPWLVEEFT 176
                         889************99....679**********999999********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-1736196IPR003441NAC domain
PROSITE profilePS5100520.51541197IPR003441NAC domain
PfamPF023653.1E-942176IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MAIKNKNRKK RASAAAAAAS SAVVSSSAAP PPAHPLQPPP LPPGVYFSPT RDESVGILNR  60
WIAGEPLHET LGFVFVEDVY GSSPEELRRR YPPACVRGRK HSWWFLCDTR FQSSKKPPAP  120
GARRRADRRV ATGGYWRLEQ SRKDIPVAGG VKNCFGFYLG PGGKRAKTPW LVEEFTSARD  180
DGAGKGGQPA LYRLYVTPRS TNDVVREIFG EDGIEWAGGV KRPMRVEVPA QLFDAVAGLL  240
PHGRVRYRPP AQQHPPPPPP ALLDYEPQAQ GHFFSGAGLL PGQYDYEQQF WGVAPPPEGV  300
LLGQYDYEQQ QFWGLPPPQP PPLASPGAPG EIPEGDLGQY EEQFFSEDAQ PPPPQPPPAS  360
PGPCPEIPAG ELVRYGDERH DDQLLSPPAS PGLLLENLAD NMSVSWDELS QLFEKNQAEA  420
EKPAAEEEAE KAQEFDSLVN IVDDFERFSQ ND*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010236658.21e-103PREDICTED: NAC domain-containing protein 55-like
TrEMBLI1ITX51e-180I1ITX5_BRADI; Uncharacterized protein
STRINGBRADI4G41200.11e-180(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP135701724